ENTRY ko01110 Pathway NAME Biosynthesis of secondary metabolites PATHWAY_MAP ko01110 Biosynthesis of secondary metabolites MODULE M00012 Glyoxylate cycle [PATH:ko01110] M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ko01110] M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ko01110] M00021 Cysteine biosynthesis, serine => cysteine [PATH:ko01110] M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ko01110] M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:ko01110] M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ko01110] M00026 Histidine biosynthesis, PRPP => histidine [PATH:ko01110] M00039 Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:ko01110] M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ko01110] M00095 C5 isoprenoid biosynthesis, mevalonate pathway [PATH:ko01110] M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ko01110] M00097 beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:ko01110] M00102 Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol [PATH:ko01110] M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:ko01110] M00113 Jasmonic acid biosynthesis [PATH:ko01110] M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:ko01110] M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ko01110] M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ko01110] M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ko01110] M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ko01110] M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ko01110] M00137 Flavanone biosynthesis, phenylalanine => naringenin [PATH:ko01110] M00138 Flavonoid biosynthesis, naringenin => pelargonidin [PATH:ko01110] M00364 C10-C20 isoprenoid biosynthesis, bacteria [PATH:ko01110] M00365 C10-C20 isoprenoid biosynthesis, archaea [PATH:ko01110] M00366 C10-C20 isoprenoid biosynthesis, plants [PATH:ko01110] M00367 C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:ko01110] M00368 Ethylene biosynthesis, methionine => ethylene [PATH:ko01110] M00369 Cyanogenic glycoside biosynthesis, tyrosine => dhurrin [PATH:ko01110] M00370 Glucosinolate biosynthesis, tryptophan => glucobrassicin [PATH:ko01110] M00371 Castasterone biosynthesis, campesterol => castasterone [PATH:ko01110] M00372 Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:ko01110] M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ko01110] M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ko01110] M00532 Photorespiration [PATH:ko01110] M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ko01110] M00661 Paspaline biosynthesis, geranylgeranyl-PP + indoleglycerol phosphate => paspaline [PATH:ko01110] M00672 Penicillin biosynthesis, aminoadipate + cycteine + valine => penicillin [PATH:ko01110] M00673 Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C [PATH:ko01110] M00674 Clavaminate biosynthesis, arginine + glyceraldehyde-3P => clavaminate [PATH:ko01110] M00675 Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate [PATH:ko01110] M00736 Nocardicin A biosynthesis, L-pHPG + arginine + serine => nocardicin A [PATH:ko01110] M00773 Tylosin biosynthesis, methylmalonyl-CoA + malonyl-CoA => tylactone => tylosin [PATH:ko01110] M00774 Erythromycin biosynthesis, propanoyl-CoA + methylmalonyl-CoA => deoxyerythronolide B => erythromycin A/B [PATH:ko01110] M00775 Oleandomycin biosynthesis, malonyl-CoA + methylmalonyl-CoA => 8,8a-deoxyoleandolide => oleandomycin [PATH:ko01110] M00776 Pikromycin/methymycin biosynthesis, methylmalonyl-CoA + malonyl-CoA => narbonolide/10-deoxymethynolide => pikromycin/methymycin [PATH:ko01110] M00777 Avermectin biosynthesis, 2-methylbutanoyl-CoA/isobutyryl-CoA => 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 1a/1b aglycone => avermectin A1a/B1a/A1b/B1b [PATH:ko01110] M00778 Type II polyketide backbone biosynthesis, acyl-CoA + malonyl-CoA => polyketide [PATH:ko01110] M00779 Dihydrokalafungin biosynthesis, octaketide => dihydrokalafungin [PATH:ko01110] M00780 Tetracycline/oxytetracycline biosynthesis, pretetramide => tetracycline/oxytetracycline [PATH:ko01110] M00781 Nogalavinone/aklavinone biosynthesis, deoxynogalonate/deoxyaklanonate => nogalavinone/aklavinone [PATH:ko01110] M00782 Mithramycin biosynthesis, 4-demethylpremithramycinone => mithramycin [PATH:ko01110] M00783 Tetracenomycin C/8-demethyltetracenomycin C biosynthesis, tetracenomycin F2 => tetracenomycin C/8-demethyltetracenomycin C [PATH:ko01110] M00784 Elloramycin biosynthesis, 8-demethyltetracenomycin C => elloramycin A [PATH:ko01110] M00785 Cycloserine biosynthesis, arginine/serine => cycloserine [PATH:ko01110] M00786 Fumitremorgin alkaloid biosynthesis, tryptophan + proline => fumitremorgin C/A [PATH:ko01110] M00787 Bacilysin biosynthesis, prephenate => bacilysin [PATH:ko01110] M00788 Terpentecin biosynthesis, GGAP => terpentecin [PATH:ko01110] M00789 Rebeccamycin biosynthesis, tryptophan => rebeccamycin [PATH:ko01110] M00790 Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:ko01110] M00793 dTDP-L-rhamnose biosynthesis [PATH:ko01110] M00794 dTDP-6-deoxy-D-allose biosynthesis [PATH:ko01110] M00795 dTDP-beta-L-noviose biosynthesis [PATH:ko01110] M00796 dTDP-D-mycaminose biosynthesis [PATH:ko01110] M00797 dTDP-D-desosamine biosynthesis [PATH:ko01110] M00798 dTDP-L-mycarose biosynthesis [PATH:ko01110] M00799 dTDP-L-oleandrose biosynthesis [PATH:ko01110] M00800 dTDP-L-megosamine biosynthesis [PATH:ko01110] M00801 dTDP-L-olivose biosynthesis [PATH:ko01110] M00802 dTDP-D-forosamine biosynthesis [PATH:ko01110] M00803 dTDP-D-angolosamine biosynthesis [PATH:ko01110] M00805 Staurosporine biosynthesis, tryptophan => staurosporine [PATH:ko01110] M00808 Violacein biosynthesis, tryptophan => violacein [PATH:ko01110] M00814 Acarbose biosynthesis, sedoheptulopyranose-7P => acarbose [PATH:ko01110] M00815 Validamycin A biosynthesis, sedoheptulopyranose-7P => validamycin A [PATH:ko01110] M00819 Pentalenolactone biosynthesis, farnesyl-PP => pentalenolactone [PATH:ko01110] M00823 Chlortetracycline biosynthesis, pretetramide => chlortetracycline [PATH:ko01110] M00824 9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core [PATH:ko01110] M00825 10-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 10-membered enediyne core [PATH:ko01110] M00826 C-1027 benzoxazolinate moiety biosynthesis, chorismate => benzoxazolinyl-CoA [PATH:ko01110] M00827 C-1027 beta-amino acid moiety biosynthesis, tyrosine => 3-chloro-4,5-dihydroxy-beta-phenylalanyl-PCP [PATH:ko01110] M00828 Maduropeptin beta-hydroxy acid moiety biosynthesis, tyrosine => 3-(4-hydroxyphenyl)-3-oxopropanoyl-PCP [PATH:ko01110] M00829 3,6-Dimethylsalicylyl-CoA biosynthesis, malonyl-CoA => 6-methylsalicylate => 3,6-dimethylsalicylyl-CoA [PATH:ko01110] M00830 Neocarzinostatin naphthoate moiety biosynthesis, malonyl-CoA => 2-hydroxy-5-methyl-1-naphthoate => 2-hydroxy-7-methoxy-5-methyl-1-naphthoyl-CoA [PATH:ko01110] M00831 Kedarcidin 2-hydroxynaphthoate moiety biosynthesis, malonyl-CoA => 3,6,8-trihydroxy-2-naphthoate => 3-hydroxy-7,8-dimethoxy-6-isopropoxy-2-naphthoyl-CoA [PATH:ko01110] M00832 Kedarcidin 2-aza-3-chloro-beta-tyrosine moiety biosynthesis, azatyrosine => 2-aza-3-chloro-beta-tyrosyl-PCP [PATH:ko01110] M00833 Calicheamicin biosynthesis, calicheamicinone => calicheamicin [PATH:ko01110] M00834 Calicheamicin orsellinate moiety biosynthesis, malonyl-CoA => orsellinate-ACP => 5-iodo-2,3-dimethoxyorsellinate-ACP [PATH:ko01110] M00835 Pyocyanine biosynthesis, chorismate => pyocyanine [PATH:ko01110] M00837 Prodigiosin biosynthesis, L-proline => prodigiosin [PATH:ko01110] M00838 Undecylprodigiosin biosynthesis, L-proline => undecylprodigiosin [PATH:ko01110] M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ko01110] M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:ko01110] M00848 Aurachin biosynthesis, anthranilate => aurachin A [PATH:ko01110] M00849 C5 isoprenoid biosynthesis, mevalonate pathway, archaea [PATH:ko01110] M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:ko01110] M00875 Staphyloferrin B biosynthesis, L-serine => staphyloferrin B [PATH:ko01110] M00876 Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:ko01110] M00877 Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:ko01110] M00889 Puromycin biosynthesis, ATP => puromycin [PATH:ko01110] M00890 Roseoflavin biosynthesis, FMN => roseoflavin [PATH:ko01110] M00891 Ditryptophenaline biosynthesis, tryptophan + phenylalanine => ditryptophenaline [PATH:ko01110] M00893 Lovastatin biosynthesis, malonyl-CoA => lovastatin acid [PATH:ko01110] M00894 Cannabidiol biosynthesis, malonyl-CoA => cannabidiol/dronabinol [PATH:ko01110] M00900 Crocin biosynthesis, crocetin => crocin [PATH:ko01110] M00901 Fumiquinazoline biosynthesis, tryptophan + alanine + anthranilate => fumiquinazoline [PATH:ko01110] M00902 Podophyllotoxin biosynthesis, coniferyl alcohol => podophyllotoxin [PATH:ko01110] M00903 Fosfomycin biosynthesis, phosphoenolpyruvate => fosfomycin [PATH:ko01110] M00904 Dapdiamides biosynthesis, L-2,3-diaminopropanoate => dapdiamide A/B/C [PATH:ko01110] M00905 Grixazone biosynthesis, aspartate 4-semialdehyde => grixazone B [PATH:ko01110] M00906 Ethynylserine biosynthesis, lysine => ethynylserine [PATH:ko01110] M00910 Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:ko01110] M00917 Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:ko01110] M00918 Aerobactin biosynthesis, lysine => aerobactin [PATH:ko01110] M00921 Cyclooctatin biosynthesis, dimethylallyl-PP + isopentenyl-PP => cyclooctatin [PATH:ko01110] M00927 Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:ko01110] M00928 Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:ko01110] M00929 Gibberellin A1 biosynthesis, GGPP => GA1 [PATH:ko01110] M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:ko01110] M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:ko01110] M00934 Mycinamicin biosynthesis, malonyl-CoA + methylmalonyl-CoA => protomycinolide IV => mycinamicin II [PATH:ko01110] M00936 Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:ko01110] M00937 Aflatoxin biosynthesis, malonyl-CoA => aflatoxin B1 [PATH:ko01110] M00940 Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:ko01110] M00941 Isoflavone biosynthesis, liquiritigenin/naringenin => daidzein/genistein [PATH:ko01110] M00942 Pterocarpan biosynthesis, daidzein => medicarpin [PATH:ko01110] M00943 Reticuline biosynthesis, dopamine + 4HPAA => (S)-reticuline [PATH:ko01110] M00944 Morphine biosynthesis, (S)-reticuline => morphine [PATH:ko01110] M00945 Sanguinarine biosynthesis, (S)-reticuline => sanguinarine [PATH:ko01110] M00946 Noscapine biosynthesis, (S)-reticuline => noscapine [PATH:ko01110] M00951 Cremeomycin biosynthesis, aspartate/3,4-AHBA => cremeomycin [PATH:ko01110] M00952 Benzoxazinoid biosynthesis, indoleglycerol phosphate => DIMBOA-glucoside [PATH:ko01110] M00953 Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid [PATH:ko01110] M00961 Betacyanin biosynthesis, L-tyrosine => amaranthin [PATH:ko01110] M00962 Psilocybin biosynthesis, tryptophan => psilocybin [PATH:ko01110] M00963 Chanoclavine aldehyde biosynthesis, tryptophan => chanoclavine-I aldehyde [PATH:ko01110] M00964 Fumigaclavine biosynthesis, chanoclavine-I aldehyde => fumigaclavine C [PATH:ko01110] M00965 Vinblastine biosynthesis, geissoschizine => vinblastine [PATH:ko01110] M00969 Fumagillin biosynthesis, farnesyl-PP => fumagillin [PATH:ko01110] M00971 QS-7 biosynthesis, 2,3-epoxysqualene => QS-7 [PATH:ko01110] M00978 Ornithine-ammonia cycle [PATH:ko01110] M00979 Ajmaline biosynthesis, geissoschizine => ajmaline [PATH:ko01110] M00980 Strychnine biosynthesis, geissoschizine => strychnine [PATH:ko01110] M00981 Geissoschizine biosynthesis, tryptophan => geissoschizine [PATH:ko01110] REL_PATHWAY ko00010 Glycolysis / Gluconeogenesis ko00020 Citrate cycle (TCA cycle) ko00030 Pentose phosphate pathway ko00053 Ascorbate and aldarate metabolism ko00073 Cutin, suberine and wax biosynthesis ko00074 Mycolic acid biosynthesis ko00100 Steroid biosynthesis ko00130 Ubiquinone and other terpenoid-quinone biosynthesis ko00220 Arginine biosynthesis ko00230 Purine metabolism ko00232 Caffeine metabolism ko00250 Alanine, aspartate and glutamate metabolism ko00253 Tetracycline biosynthesis ko00254 Aflatoxin biosynthesis ko00260 Glycine, serine and threonine metabolism ko00261 Monobactam biosynthesis ko00270 Cysteine and methionine metabolism ko00280 Valine, leucine and isoleucine degradation ko00290 Valine, leucine and isoleucine biosynthesis ko00300 Lysine biosynthesis ko00311 Penicillin and cephalosporin biosynthesis ko00331 Clavulanic acid biosynthesis ko00332 Carbapenem biosynthesis ko00333 Prodigiosin biosynthesis ko00340 Histidine metabolism ko00380 Tryptophan metabolism ko00400 Phenylalanine, tyrosine and tryptophan biosynthesis ko00401 Novobiocin biosynthesis ko00402 Benzoxazinoid biosynthesis ko00403 Indole diterpene alkaloid biosynthesis ko00404 Staurosporine biosynthesis ko00405 Phenazine biosynthesis ko00440 Phosphonate and phosphinate metabolism ko00460 Cyanoamino acid metabolism ko00500 Starch and sucrose metabolism ko00521 Streptomycin biosynthesis ko00522 Biosynthesis of 12-, 14- and 16-membered macrolides ko00523 Polyketide sugar unit biosynthesis ko00524 Neomycin, kanamycin and gentamicin biosynthesis ko00525 Acarbose and validamycin biosynthesis ko00564 Glycerophospholipid metabolism ko00592 alpha-Linolenic acid metabolism ko00630 Glyoxylate and dicarboxylate metabolism ko00650 Butanoate metabolism ko00740 Riboflavin metabolism ko00770 Pantothenate and CoA biosynthesis ko00860 Porphyrin metabolism ko00900 Terpenoid backbone biosynthesis ko00901 Indole alkaloid biosynthesis ko00902 Monoterpenoid biosynthesis ko00904 Diterpenoid biosynthesis ko00905 Brassinosteroid biosynthesis ko00906 Carotenoid biosynthesis ko00908 Zeatin biosynthesis ko00909 Sesquiterpenoid and triterpenoid biosynthesis ko00940 Phenylpropanoid biosynthesis ko00941 Flavonoid biosynthesis ko00942 Anthocyanin biosynthesis ko00943 Isoflavonoid biosynthesis ko00944 Flavone and flavonol biosynthesis ko00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis ko00950 Isoquinoline alkaloid biosynthesis ko00960 Tropane, piperidine and pyridine alkaloid biosynthesis ko00965 Betalain biosynthesis ko00966 Glucosinolate biosynthesis ko00996 Biosynthesis of various alkaloids ko00997 Biosynthesis of various other secondary metabolites ko00998 Biosynthesis of various antibiotics ko00999 Biosynthesis of various plant secondary metabolites ko01051 Biosynthesis of ansamycins ko01052 Type I polyketide structures ko01053 Biosynthesis of siderophore group nonribosomal peptides ko01055 Biosynthesis of vancomycin group antibiotics ko01056 Biosynthesis of type II polyketide backbone ko01057 Biosynthesis of type II polyketide products ko01059 Biosynthesis of enediyne antibiotics ///